Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col1a1P11087 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col1a1P11087 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col1a1P11087 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col1a1P11087 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col1a1P11087 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col1a1P11087 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col1a1P11087 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col1a1P11087 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col1a1P11087 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Col1a1P11087 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.88■□□□□ 0.13
Col1a1P11087 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col1a1P11087 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC15.88■□□□□ 0.13
Col1a1P11087 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Col1a1P11087 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col1a1P11087 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.88■□□□□ 0.13
Col1a1P11087 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col1a1P11087 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col1a1P11087 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col1a1P11087 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col1a1P11087 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col1a1P11087 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col1a1P11087 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Col1a1P11087 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Col1a1P11087 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Col1a1P11087 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Col1a1P11087 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
Col1a1P11087 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Col1a1P11087 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col1a1P11087 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col1a1P11087 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col1a1P11087 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col1a1P11087 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col1a1P11087 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.87■□□□□ 0.13
Col1a1P11087 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col1a1P11087 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.87■□□□□ 0.13
Col1a1P11087 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.87■□□□□ 0.13
Col1a1P11087 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.87■□□□□ 0.13
Col1a1P11087 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col1a1P11087 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.87■□□□□ 0.13
Col1a1P11087 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.87■□□□□ 0.13
Col1a1P11087 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col1a1P11087 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col1a1P11087 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC15.87■□□□□ 0.13
Col1a1P11087 Gm43138-201ENSMUST00000199123 708 ntBASIC15.87■□□□□ 0.13
Col1a1P11087 Gm18584-201ENSMUST00000203098 964 ntBASIC15.87■□□□□ 0.13
Col1a1P11087 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.87■□□□□ 0.13
Col1a1P11087 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col1a1P11087 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Col1a1P11087 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col1a1P11087 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
Col1a1P11087 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Col1a1P11087 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col1a1P11087 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Col1a1P11087 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col1a1P11087 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Col1a1P11087 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col1a1P11087 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col1a1P11087 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col1a1P11087 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col1a1P11087 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col1a1P11087 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col1a1P11087 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Col1a1P11087 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15.86■□□□□ 0.13
Col1a1P11087 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.86■□□□□ 0.13
Col1a1P11087 Gm5896-201ENSMUST00000189662 1024 ntBASIC15.86■□□□□ 0.13
Col1a1P11087 Gm28693-202ENSMUST00000190758 331 ntBASIC15.86■□□□□ 0.13
Col1a1P11087 Gm9445-201ENSMUST00000207454 1285 ntBASIC15.86■□□□□ 0.13
Col1a1P11087 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.86■□□□□ 0.13
Col1a1P11087 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Col1a1P11087 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col1a1P11087 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms