Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Gm18027-201ENSMUST00000218947 619 ntBASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Chmp6P0C0A3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.98□□□□□ -0.01
Chmp6P0C0A3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Gm37714-201ENSMUST00000194742 342 ntBASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp6P0C0A3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.97□□□□□ -0.01
Chmp6P0C0A3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Gm27838-201ENSMUST00000184829 128 ntBASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Mir6977-201ENSMUST00000184960 64 ntBASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.97□□□□□ -0.01
Chmp6P0C0A3 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.97□□□□□ -0.01
Chmp6P0C0A3 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp6P0C0A3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp6P0C0A3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms