Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NclP09405 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NclP09405 Gm24447-201ENSMUST00000083977 338 ntBASIC20.37■□□□□ 0.85
NclP09405 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NclP09405 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NclP09405 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NclP09405 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
NclP09405 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NclP09405 AL645783.1-201ENSMUST00000221416 1832 ntBASIC20.37■□□□□ 0.85
NclP09405 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
NclP09405 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NclP09405 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
NclP09405 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NclP09405 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NclP09405 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NclP09405 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC20.36■□□□□ 0.85
NclP09405 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC20.36■□□□□ 0.85
NclP09405 Gm5303-201ENSMUST00000117943 1252 ntBASIC20.36■□□□□ 0.85
NclP09405 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NclP09405 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NclP09405 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
NclP09405 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NclP09405 Mir7085-201ENSMUST00000184353 66 ntBASIC20.36■□□□□ 0.85
NclP09405 Gm27486-201ENSMUST00000184923 80 ntBASIC20.36■□□□□ 0.85
NclP09405 Gm5276-201ENSMUST00000196683 1047 ntBASIC20.36■□□□□ 0.85
NclP09405 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC20.36■□□□□ 0.85
NclP09405 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
NclP09405 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC20.36■□□□□ 0.85
NclP09405 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NclP09405 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NclP09405 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NclP09405 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
NclP09405 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC20.36■□□□□ 0.85
NclP09405 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NclP09405 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NclP09405 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
NclP09405 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NclP09405 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
NclP09405 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NclP09405 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NclP09405 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NclP09405 AC114008.2-201ENSMUST00000227699 1347 ntBASIC20.35■□□□□ 0.85
NclP09405 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NclP09405 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NclP09405 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC20.35■□□□□ 0.85
NclP09405 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NclP09405 Gm44397-201ENSMUST00000195950 113 ntBASIC20.35■□□□□ 0.85
NclP09405 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NclP09405 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NclP09405 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NclP09405 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NclP09405 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NclP09405 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NclP09405 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC20.35■□□□□ 0.85
NclP09405 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NclP09405 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NclP09405 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC20.35■□□□□ 0.85
NclP09405 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NclP09405 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC20.35■□□□□ 0.85
NclP09405 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NclP09405 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NclP09405 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NclP09405 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NclP09405 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NclP09405 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NclP09405 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NclP09405 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC20.34■□□□□ 0.85
NclP09405 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NclP09405 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NclP09405 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NclP09405 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NclP09405 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NclP09405 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
NclP09405 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NclP09405 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NclP09405 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
NclP09405 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NclP09405 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NclP09405 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NclP09405 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NclP09405 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NclP09405 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NclP09405 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NclP09405 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NclP09405 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
NclP09405 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NclP09405 Gm45779-201ENSMUST00000212189 4064 ntBASIC20.33■□□□□ 0.85
NclP09405 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NclP09405 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NclP09405 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC20.33■□□□□ 0.85
NclP09405 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC20.33■□□□□ 0.85
NclP09405 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NclP09405 Gm2445-201ENSMUST00000182798 989 ntBASIC20.33■□□□□ 0.85
NclP09405 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC20.33■□□□□ 0.85
NclP09405 Gm10710-201ENSMUST00000047876 3971 ntBASIC20.33■□□□□ 0.84
NclP09405 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NclP09405 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC20.33■□□□□ 0.84
NclP09405 AC167013.2-201ENSMUST00000228520 2684 ntBASIC20.33■□□□□ 0.84
NclP09405 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NclP09405 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms