Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.69
Hoxd3P09027 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC10.77□□□□□ -0.69
Hoxd3P09027 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.77□□□□□ -0.69
Hoxd3P09027 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC10.77□□□□□ -0.69
Hoxd3P09027 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.77□□□□□ -0.69
Hoxd3P09027 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Hoxd3P09027 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Hoxd3P09027 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.77□□□□□ -0.69
Hoxd3P09027 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.77□□□□□ -0.69
Hoxd3P09027 Gm23984-201ENSMUST00000157139 203 ntBASIC10.77□□□□□ -0.69
Hoxd3P09027 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC10.77□□□□□ -0.69
Hoxd3P09027 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Hoxd3P09027 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Hoxd3P09027 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Gm28925-201ENSMUST00000188586 168 ntBASIC10.77□□□□□ -0.69
Hoxd3P09027 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Hoxd3P09027 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.77□□□□□ -0.69
Hoxd3P09027 Gm18018-201ENSMUST00000198273 408 ntBASIC10.77□□□□□ -0.69
Hoxd3P09027 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Gm6745-201ENSMUST00000199216 526 ntBASIC10.77□□□□□ -0.69
Hoxd3P09027 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 AC102542.1-201ENSMUST00000225204 1138 ntBASIC10.77□□□□□ -0.69
Hoxd3P09027 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Hoxd3P09027 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Gm6159-201ENSMUST00000191249 1724 ntBASIC10.77□□□□□ -0.69
Hoxd3P09027 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Hoxd3P09027 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Hoxd3P09027 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.77□□□□□ -0.69
Hoxd3P09027 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxd3P09027 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.76□□□□□ -0.69
Hoxd3P09027 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Hoxd3P09027 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Hoxd3P09027 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.76□□□□□ -0.69
Hoxd3P09027 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC10.76□□□□□ -0.69
Hoxd3P09027 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.76□□□□□ -0.69
Hoxd3P09027 Gm12091-201ENSMUST00000146791 830 ntBASIC10.76□□□□□ -0.69
Hoxd3P09027 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.76□□□□□ -0.69
Hoxd3P09027 Gm18595-201ENSMUST00000175736 1068 ntBASIC10.76□□□□□ -0.69
Hoxd3P09027 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC10.76□□□□□ -0.69
Hoxd3P09027 Gm45668-201ENSMUST00000211271 493 ntBASIC10.76□□□□□ -0.69
Hoxd3P09027 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.76□□□□□ -0.69
Hoxd3P09027 Gm7653-201ENSMUST00000214567 508 ntBASIC10.76□□□□□ -0.69
Hoxd3P09027 Gm18624-201ENSMUST00000220966 658 ntBASIC10.76□□□□□ -0.69
Hoxd3P09027 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.76□□□□□ -0.69
Hoxd3P09027 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Hoxd3P09027 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxd3P09027 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.75□□□□□ -0.69
Hoxd3P09027 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms