Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Hoxc8P09025 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxc8P09025 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxc8P09025 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxc8P09025 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxc8P09025 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.52□□□□□ -0.09
Hoxc8P09025 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Hoxc8P09025 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Hoxc8P09025 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Hoxc8P09025 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Hoxc8P09025 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Hoxc8P09025 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.51□□□□□ -0.09
Hoxc8P09025 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Gm8805-201ENSMUST00000117848 313 ntBASIC14.51□□□□□ -0.09
Hoxc8P09025 Gm38241-201ENSMUST00000192641 898 ntBASIC14.51□□□□□ -0.09
Hoxc8P09025 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Gm18935-201ENSMUST00000212692 664 ntBASIC14.51□□□□□ -0.09
Hoxc8P09025 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.51□□□□□ -0.09
Hoxc8P09025 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.51□□□□□ -0.09
Hoxc8P09025 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Hoxc8P09025 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.51□□□□□ -0.09
Hoxc8P09025 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.51□□□□□ -0.09
Hoxc8P09025 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.51□□□□□ -0.09
Hoxc8P09025 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.51□□□□□ -0.09
Hoxc8P09025 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxc8P09025 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Hoxc8P09025 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.51□□□□□ -0.09
Hoxc8P09025 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Hoxc8P09025 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Hoxc8P09025 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.5□□□□□ -0.09
Hoxc8P09025 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.5□□□□□ -0.09
Hoxc8P09025 Gm16479-201ENSMUST00000121706 932 ntBASIC14.5□□□□□ -0.09
Hoxc8P09025 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.5□□□□□ -0.09
Hoxc8P09025 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.5□□□□□ -0.09
Hoxc8P09025 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.5□□□□□ -0.09
Hoxc8P09025 Gm29396-201ENSMUST00000185659 716 ntBASIC14.5□□□□□ -0.09
Hoxc8P09025 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Gm37259-201ENSMUST00000193903 849 ntBASIC14.5□□□□□ -0.09
Hoxc8P09025 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.5□□□□□ -0.09
Hoxc8P09025 Gm8227-201ENSMUST00000223306 571 ntBASIC14.5□□□□□ -0.09
Hoxc8P09025 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.5□□□□□ -0.09
Hoxc8P09025 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Hoxc8P09025 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Hoxc8P09025 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.5□□□□□ -0.09
Hoxc8P09025 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.5□□□□□ -0.09
Hoxc8P09025 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.5□□□□□ -0.09
Hoxc8P09025 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hoxc8P09025 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc8P09025 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.49□□□□□ -0.09
Hoxc8P09025 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms