Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
P04224 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Mir8098-201ENSMUST00000184011 137 ntBASIC12.07□□□□□ -0.48
P04224 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.07□□□□□ -0.48
P04224 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
P04224 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.07□□□□□ -0.48
P04224 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04224 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.06□□□□□ -0.48
P04224 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
P04224 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
P04224 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.06□□□□□ -0.48
P04224 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Olfr286-202ENSMUST00000205305 969 ntBASIC12.06□□□□□ -0.48
P04224 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.06□□□□□ -0.48
P04224 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.06□□□□□ -0.48
P04224 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.06□□□□□ -0.48
P04224 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
P04224 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
P04224 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.06□□□□□ -0.48
P04224 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
P04224 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
P04224 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
P04224 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
P04224 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
P04224 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.05□□□□□ -0.48
P04224 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.05□□□□□ -0.48
P04224 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.05□□□□□ -0.48
P04224 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.05□□□□□ -0.48
P04224 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.05□□□□□ -0.48
P04224 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.05□□□□□ -0.48
P04224 Gm25925-201ENSMUST00000158314 306 ntBASIC12.05□□□□□ -0.48
P04224 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
P04224 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 Gm27300-201ENSMUST00000184085 97 ntBASIC12.05□□□□□ -0.48
P04224 Gm27335-201ENSMUST00000184758 97 ntBASIC12.05□□□□□ -0.48
P04224 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.05□□□□□ -0.48
P04224 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 Gm5864-201ENSMUST00000202263 970 ntBASIC12.05□□□□□ -0.48
P04224 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 Gm15590-201ENSMUST00000078419 552 ntBASIC12.05□□□□□ -0.48
P04224 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.05□□□□□ -0.48
P04224 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.05□□□□□ -0.48
P04224 Gm10154-201ENSMUST00000084445 354 ntBASIC12.05□□□□□ -0.48
P04224 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
P04224 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P04224 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms