Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04213 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04213 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04213 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.2□□□□□ -0.3
P04213 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.2□□□□□ -0.3
P04213 Gm27430-201ENSMUST00000184585 107 ntBASIC13.2□□□□□ -0.3
P04213 Gm27321-201ENSMUST00000185021 205 ntBASIC13.2□□□□□ -0.3
P04213 Gm17837-201ENSMUST00000186435 985 ntBASIC13.2□□□□□ -0.3
P04213 Gm44333-201ENSMUST00000197168 107 ntBASIC13.2□□□□□ -0.3
P04213 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04213 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04213 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04213 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.2□□□□□ -0.3
P04213 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04213 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04213 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04213 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04213 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.2□□□□□ -0.3
P04213 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04213 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
P04213 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.19□□□□□ -0.3
P04213 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.19□□□□□ -0.3
P04213 Gm15393-201ENSMUST00000120499 219 ntBASIC13.19□□□□□ -0.3
P04213 Gm13616-201ENSMUST00000120600 222 ntBASIC13.19□□□□□ -0.3
P04213 Gm13385-201ENSMUST00000121089 220 ntBASIC13.19□□□□□ -0.3
P04213 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.19□□□□□ -0.3
P04213 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
P04213 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.19□□□□□ -0.3
P04213 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Gm27680-201ENSMUST00000184192 160 ntBASIC13.19□□□□□ -0.3
P04213 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.19□□□□□ -0.3
P04213 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.19□□□□□ -0.3
P04213 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
P04213 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
P04213 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04213 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
P04213 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
P04213 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.18□□□□□ -0.3
P04213 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.18□□□□□ -0.3
P04213 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.18□□□□□ -0.3
P04213 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
P04213 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
P04213 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
P04213 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
P04213 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
P04213 Gm10766-202ENSMUST00000194123 606 ntBASIC13.18□□□□□ -0.3
P04213 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
P04213 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.18□□□□□ -0.3
P04213 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.18□□□□□ -0.3
P04213 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
P04213 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04213 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
P04213 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
P04213 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P04213 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.17□□□□□ -0.3
P04213 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04213 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04213 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04213 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms