Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
CfdP03953 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CfdP03953 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CfdP03953 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.49□□□□□ -0.57
CfdP03953 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CfdP03953 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.49□□□□□ -0.57
CfdP03953 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CfdP03953 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CfdP03953 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CfdP03953 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CfdP03953 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CfdP03953 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CfdP03953 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CfdP03953 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CfdP03953 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CfdP03953 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
CfdP03953 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CfdP03953 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
CfdP03953 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CfdP03953 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.48□□□□□ -0.57
CfdP03953 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
CfdP03953 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.48□□□□□ -0.57
CfdP03953 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.48□□□□□ -0.57
CfdP03953 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.48□□□□□ -0.57
CfdP03953 Gm28033-201ENSMUST00000184224 96 ntBASIC11.48□□□□□ -0.57
CfdP03953 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.48□□□□□ -0.57
CfdP03953 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Gm10060-201ENSMUST00000212002 111 ntBASIC11.48□□□□□ -0.57
CfdP03953 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.48□□□□□ -0.57
CfdP03953 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CfdP03953 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.48□□□□□ -0.57
CfdP03953 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.48□□□□□ -0.57
CfdP03953 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CfdP03953 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.48□□□□□ -0.57
CfdP03953 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.48□□□□□ -0.57
CfdP03953 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
CfdP03953 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CfdP03953 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.47□□□□□ -0.57
CfdP03953 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.47□□□□□ -0.57
CfdP03953 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.47□□□□□ -0.57
CfdP03953 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.47□□□□□ -0.57
CfdP03953 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.47□□□□□ -0.57
CfdP03953 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.47□□□□□ -0.57
CfdP03953 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.47□□□□□ -0.57
CfdP03953 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.47□□□□□ -0.57
CfdP03953 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CfdP03953 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CfdP03953 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CfdP03953 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
CfdP03953 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CfdP03953 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.46□□□□□ -0.57
CfdP03953 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CfdP03953 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms