Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Gm18905-201ENSMUST00000205454 928 ntBASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Igh-VJ558P01758 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igh-VJ558P01758 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms