Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm12490-201ENSMUST00000120255 560 ntBASIC13.49□□□□□ -0.25
ClppO88696 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.49□□□□□ -0.25
ClppO88696 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.49□□□□□ -0.25
ClppO88696 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClppO88696 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.49□□□□□ -0.25
ClppO88696 Gm6916-202ENSMUST00000205523 195 ntBASIC13.49□□□□□ -0.25
ClppO88696 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.49□□□□□ -0.25
ClppO88696 Gm19220-201ENSMUST00000222682 803 ntBASIC13.49□□□□□ -0.25
ClppO88696 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
ClppO88696 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.49□□□□□ -0.25
ClppO88696 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
ClppO88696 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
ClppO88696 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClppO88696 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClppO88696 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ClppO88696 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClppO88696 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClppO88696 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClppO88696 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
ClppO88696 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClppO88696 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClppO88696 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ClppO88696 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClppO88696 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
ClppO88696 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ClppO88696 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.48□□□□□ -0.25
ClppO88696 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ClppO88696 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.48□□□□□ -0.25
ClppO88696 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.48□□□□□ -0.25
ClppO88696 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.48□□□□□ -0.25
ClppO88696 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.48□□□□□ -0.25
ClppO88696 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.48□□□□□ -0.25
ClppO88696 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.48□□□□□ -0.25
ClppO88696 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.48□□□□□ -0.25
ClppO88696 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Gm9797-201ENSMUST00000052902 613 ntBASIC13.48□□□□□ -0.25
ClppO88696 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ClppO88696 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.47□□□□□ -0.25
ClppO88696 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.47□□□□□ -0.25
ClppO88696 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ClppO88696 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ClppO88696 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.47□□□□□ -0.25
ClppO88696 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ClppO88696 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 Gm15460-201ENSMUST00000118147 391 ntBASIC13.47□□□□□ -0.25
ClppO88696 Gm15957-201ENSMUST00000118893 974 ntBASIC13.47□□□□□ -0.25
ClppO88696 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.47□□□□□ -0.25
ClppO88696 Gm28760-201ENSMUST00000185995 736 ntBASIC13.47□□□□□ -0.25
ClppO88696 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.47□□□□□ -0.25
ClppO88696 Gm42612-201ENSMUST00000197986 623 ntBASIC13.47□□□□□ -0.25
ClppO88696 Gm43170-201ENSMUST00000199827 612 ntBASIC13.47□□□□□ -0.25
ClppO88696 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ClppO88696 Gm45668-201ENSMUST00000211271 493 ntBASIC13.47□□□□□ -0.25
ClppO88696 Gm7653-201ENSMUST00000214567 508 ntBASIC13.47□□□□□ -0.25
ClppO88696 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.47□□□□□ -0.25
ClppO88696 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
ClppO88696 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ClppO88696 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClppO88696 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
ClppO88696 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ClppO88696 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms