Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.72■□□□□ 0.27
Cops6O88545 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops6O88545 Gm27514-201ENSMUST00000183692 110 ntBASIC16.72■□□□□ 0.27
Cops6O88545 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.72■□□□□ 0.27
Cops6O88545 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops6O88545 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops6O88545 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cops6O88545 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cops6O88545 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.72■□□□□ 0.27
Cops6O88545 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops6O88545 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cops6O88545 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops6O88545 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Cops6O88545 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cops6O88545 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops6O88545 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops6O88545 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cops6O88545 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops6O88545 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops6O88545 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops6O88545 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops6O88545 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.72■□□□□ 0.27
Cops6O88545 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops6O88545 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops6O88545 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cops6O88545 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.71■□□□□ 0.27
Cops6O88545 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cops6O88545 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cops6O88545 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Cops6O88545 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.71■□□□□ 0.27
Cops6O88545 Gm2639-201ENSMUST00000156881 1297 ntBASIC16.71■□□□□ 0.27
Cops6O88545 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cops6O88545 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.71■□□□□ 0.27
Cops6O88545 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cops6O88545 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cops6O88545 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cops6O88545 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cops6O88545 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cops6O88545 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cops6O88545 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cops6O88545 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.26
Cops6O88545 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cops6O88545 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.7■□□□□ 0.26
Cops6O88545 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC16.7■□□□□ 0.26
Cops6O88545 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC16.7■□□□□ 0.26
Cops6O88545 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.7■□□□□ 0.26
Cops6O88545 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cops6O88545 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops6O88545 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops6O88545 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops6O88545 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.7■□□□□ 0.26
Cops6O88545 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
Cops6O88545 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC16.7■□□□□ 0.26
Cops6O88545 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cops6O88545 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.7■□□□□ 0.26
Cops6O88545 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cops6O88545 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC16.7■□□□□ 0.26
Cops6O88545 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cops6O88545 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops6O88545 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cops6O88545 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops6O88545 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops6O88545 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops6O88545 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.7■□□□□ 0.26
Cops6O88545 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops6O88545 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops6O88545 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops6O88545 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops6O88545 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cops6O88545 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cops6O88545 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops6O88545 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops6O88545 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops6O88545 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops6O88545 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops6O88545 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops6O88545 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops6O88545 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops6O88545 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops6O88545 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops6O88545 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cops6O88545 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.69■□□□□ 0.26
Cops6O88545 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
Cops6O88545 Gm5370-201ENSMUST00000187187 574 ntBASIC16.69■□□□□ 0.26
Cops6O88545 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.69■□□□□ 0.26
Cops6O88545 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC16.69■□□□□ 0.26
Cops6O88545 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops6O88545 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.69■□□□□ 0.26
Cops6O88545 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cops6O88545 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cops6O88545 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cops6O88545 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops6O88545 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops6O88545 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.69■□□□□ 0.26
Cops6O88545 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops6O88545 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cops6O88545 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Cops6O88545 Gm10040-201ENSMUST00000080726 1662 ntBASIC16.69■□□□□ 0.26
Cops6O88545 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cops6O88545 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms