Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops4O88544 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cops4O88544 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops4O88544 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops4O88544 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cops4O88544 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops4O88544 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops4O88544 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops4O88544 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cops4O88544 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cops4O88544 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops4O88544 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cops4O88544 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Cops4O88544 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cops4O88544 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Cops4O88544 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cops4O88544 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Cops4O88544 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Cops4O88544 Gm2445-201ENSMUST00000182798 989 ntBASIC12.68□□□□□ -0.38
Cops4O88544 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.68□□□□□ -0.38
Cops4O88544 Gm17968-201ENSMUST00000194902 784 ntBASIC12.68□□□□□ -0.38
Cops4O88544 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.68□□□□□ -0.38
Cops4O88544 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.68□□□□□ -0.38
Cops4O88544 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.68□□□□□ -0.38
Cops4O88544 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.68□□□□□ -0.38
Cops4O88544 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Cops4O88544 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.68□□□□□ -0.38
Cops4O88544 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.68□□□□□ -0.38
Cops4O88544 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Cops4O88544 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cops4O88544 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cops4O88544 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Cops4O88544 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cops4O88544 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Cops4O88544 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Cops4O88544 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cops4O88544 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cops4O88544 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.67□□□□□ -0.38
Cops4O88544 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cops4O88544 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.67□□□□□ -0.38
Cops4O88544 Gm44492-201ENSMUST00000197012 141 ntBASIC12.67□□□□□ -0.38
Cops4O88544 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cops4O88544 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cops4O88544 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.67□□□□□ -0.38
Cops4O88544 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.67□□□□□ -0.38
Cops4O88544 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cops4O88544 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms