Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Vti1bO88384 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.13□□□□□ -0.31
Vti1bO88384 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vti1bO88384 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Vti1bO88384 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Vti1bO88384 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.13□□□□□ -0.31
Vti1bO88384 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vti1bO88384 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Vti1bO88384 Gm29541-201ENSMUST00000191351 678 ntBASIC13.13□□□□□ -0.31
Vti1bO88384 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.13□□□□□ -0.31
Vti1bO88384 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Vti1bO88384 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Vti1bO88384 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Vti1bO88384 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.13□□□□□ -0.31
Vti1bO88384 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vti1bO88384 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vti1bO88384 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.12□□□□□ -0.31
Vti1bO88384 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Vti1bO88384 Gm29310-201ENSMUST00000185468 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm21825-201ENSMUST00000185728 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm29109-201ENSMUST00000185895 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm21896-201ENSMUST00000186520 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm21873-201ENSMUST00000186728 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm21794-201ENSMUST00000187056 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm21880-201ENSMUST00000187275 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm21826-201ENSMUST00000187451 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm21198-201ENSMUST00000188393 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm21749-201ENSMUST00000189343 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm21901-201ENSMUST00000189568 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm29424-201ENSMUST00000189716 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm28599-201ENSMUST00000189838 694 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm21867-201ENSMUST00000189917 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm29269-201ENSMUST00000190087 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm21722-201ENSMUST00000190153 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm28423-201ENSMUST00000190701 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm21899-201ENSMUST00000190745 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm21910-201ENSMUST00000191163 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm21849-201ENSMUST00000191571 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm28678-201ENSMUST00000191593 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm20910-201ENSMUST00000193268 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm21871-201ENSMUST00000194621 696 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Gm7774-201ENSMUST00000200064 533 ntBASIC13.12□□□□□ -0.31
Vti1bO88384 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Vti1bO88384 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.12□□□□□ -0.31
Vti1bO88384 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.12□□□□□ -0.31
Vti1bO88384 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vti1bO88384 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.12□□□□□ -0.31
Vti1bO88384 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.12□□□□□ -0.31
Vti1bO88384 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Vti1bO88384 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.12□□□□□ -0.31
Vti1bO88384 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1bO88384 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms