Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cfdp1O88271 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Cfdp1O88271 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cfdp1O88271 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cfdp1O88271 Gm13689-201ENSMUST00000119360 685 ntBASIC17.11■□□□□ 0.33
Cfdp1O88271 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.11■□□□□ 0.33
Cfdp1O88271 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.11■□□□□ 0.33
Cfdp1O88271 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cfdp1O88271 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.11■□□□□ 0.33
Cfdp1O88271 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC17.11■□□□□ 0.33
Cfdp1O88271 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cfdp1O88271 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Cfdp1O88271 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Cfdp1O88271 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC17.11■□□□□ 0.33
Cfdp1O88271 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC17.11■□□□□ 0.33
Cfdp1O88271 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cfdp1O88271 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC17.11■□□□□ 0.33
Cfdp1O88271 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfdp1O88271 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cfdp1O88271 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfdp1O88271 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC17.1■□□□□ 0.33
Cfdp1O88271 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfdp1O88271 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC17.1■□□□□ 0.33
Cfdp1O88271 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cfdp1O88271 CT030657.3-201ENSMUST00000222707 1200 ntBASIC17.1■□□□□ 0.33
Cfdp1O88271 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Cfdp1O88271 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfdp1O88271 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfdp1O88271 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfdp1O88271 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfdp1O88271 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfdp1O88271 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfdp1O88271 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfdp1O88271 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfdp1O88271 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfdp1O88271 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cfdp1O88271 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfdp1O88271 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfdp1O88271 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfdp1O88271 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfdp1O88271 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfdp1O88271 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfdp1O88271 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cfdp1O88271 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cfdp1O88271 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfdp1O88271 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.09■□□□□ 0.33
Cfdp1O88271 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cfdp1O88271 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.09■□□□□ 0.33
Cfdp1O88271 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cfdp1O88271 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cfdp1O88271 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cfdp1O88271 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfdp1O88271 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfdp1O88271 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
Cfdp1O88271 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfdp1O88271 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cfdp1O88271 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfdp1O88271 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfdp1O88271 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cfdp1O88271 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cfdp1O88271 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.08■□□□□ 0.33
Cfdp1O88271 Gm20632-201ENSMUST00000176760 2427 ntBASIC17.08■□□□□ 0.33
Cfdp1O88271 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cfdp1O88271 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cfdp1O88271 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cfdp1O88271 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfdp1O88271 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfdp1O88271 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Cfdp1O88271 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfdp1O88271 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cfdp1O88271 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfdp1O88271 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cfdp1O88271 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfdp1O88271 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cfdp1O88271 Gm5161-201ENSMUST00000075243 853 ntBASIC17.08■□□□□ 0.32
Cfdp1O88271 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cfdp1O88271 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfdp1O88271 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cfdp1O88271 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfdp1O88271 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfdp1O88271 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms