Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ttc3O88196 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.28□□□□□ -0.12
Ttc3O88196 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Gm5187-201ENSMUST00000117317 991 ntBASIC14.28□□□□□ -0.12
Ttc3O88196 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.28□□□□□ -0.12
Ttc3O88196 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Ttc3O88196 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.28□□□□□ -0.12
Ttc3O88196 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.28□□□□□ -0.12
Ttc3O88196 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.28□□□□□ -0.12
Ttc3O88196 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ttc3O88196 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ttc3O88196 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ttc3O88196 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.28□□□□□ -0.12
Ttc3O88196 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ttc3O88196 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ttc3O88196 Gm15198-201ENSMUST00000117283 177 ntBASIC14.27□□□□□ -0.12
Ttc3O88196 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ttc3O88196 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ttc3O88196 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ttc3O88196 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.27□□□□□ -0.12
Ttc3O88196 Mir8109-201ENSMUST00000184375 117 ntBASIC14.27□□□□□ -0.12
Ttc3O88196 Gm37497-201ENSMUST00000195830 798 ntBASIC14.27□□□□□ -0.12
Ttc3O88196 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.27□□□□□ -0.12
Ttc3O88196 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.27□□□□□ -0.12
Ttc3O88196 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.27□□□□□ -0.12
Ttc3O88196 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ttc3O88196 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ttc3O88196 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ttc3O88196 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.27□□□□□ -0.12
Ttc3O88196 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ttc3O88196 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ttc3O88196 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ttc3O88196 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc3O88196 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc3O88196 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc3O88196 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc3O88196 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc3O88196 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc3O88196 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc3O88196 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Ttc3O88196 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
Ttc3O88196 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ttc3O88196 Gm13369-201ENSMUST00000119442 987 ntBASIC14.27□□□□□ -0.13
Ttc3O88196 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ttc3O88196 Gm26927-201ENSMUST00000182385 965 ntBASIC14.27□□□□□ -0.13
Ttc3O88196 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Ttc3O88196 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ttc3O88196 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc3O88196 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc3O88196 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc3O88196 Gm10146-201ENSMUST00000072739 309 ntBASIC14.27□□□□□ -0.13
Ttc3O88196 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc3O88196 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc3O88196 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc3O88196 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ttc3O88196 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.27□□□□□ -0.13
Ttc3O88196 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.26□□□□□ -0.13
Ttc3O88196 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ttc3O88196 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ttc3O88196 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ttc3O88196 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ttc3O88196 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ttc3O88196 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ttc3O88196 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ttc3O88196 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ttc3O88196 Gm14723-201ENSMUST00000118686 215 ntBASIC14.26□□□□□ -0.13
Ttc3O88196 Gm43133-201ENSMUST00000197472 463 ntBASIC14.26□□□□□ -0.13
Ttc3O88196 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ttc3O88196 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ttc3O88196 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ttc3O88196 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ttc3O88196 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ttc3O88196 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ttc3O88196 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ttc3O88196 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ttc3O88196 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ttc3O88196 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ttc3O88196 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ttc3O88196 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.26□□□□□ -0.13
Ttc3O88196 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ttc3O88196 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ttc3O88196 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ttc3O88196 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.25□□□□□ -0.13
Ttc3O88196 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ttc3O88196 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms