Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC10.84□□□□□ -0.67
Pde6dO55057 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Pde6dO55057 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.84□□□□□ -0.67
Pde6dO55057 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Pde6dO55057 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pde6dO55057 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC10.84□□□□□ -0.67
Pde6dO55057 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Gm2272-201ENSMUST00000194903 582 ntBASIC10.84□□□□□ -0.67
Pde6dO55057 Gm44608-201ENSMUST00000206827 855 ntBASIC10.84□□□□□ -0.67
Pde6dO55057 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC10.84□□□□□ -0.67
Pde6dO55057 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.84□□□□□ -0.67
Pde6dO55057 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pde6dO55057 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pde6dO55057 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
Pde6dO55057 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pde6dO55057 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Pde6dO55057 Syt7-205ENSMUST00000224135 1557 ntBASIC10.83□□□□□ -0.68
Pde6dO55057 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC10.83□□□□□ -0.68
Pde6dO55057 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pde6dO55057 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Pde6dO55057 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Gm15565-201ENSMUST00000118890 427 ntBASIC10.83□□□□□ -0.68
Pde6dO55057 Gm16026-204ENSMUST00000162652 683 ntBASIC10.83□□□□□ -0.68
Pde6dO55057 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC10.83□□□□□ -0.68
Pde6dO55057 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Gm5682-201ENSMUST00000173402 505 ntBASIC10.83□□□□□ -0.68
Pde6dO55057 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pde6dO55057 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
Pde6dO55057 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Pde6dO55057 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Pde6dO55057 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.83□□□□□ -0.68
Pde6dO55057 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pde6dO55057 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.83□□□□□ -0.68
Pde6dO55057 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pde6dO55057 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pde6dO55057 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.83□□□□□ -0.68
Pde6dO55057 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Pde6dO55057 Gm37500-201ENSMUST00000192059 1443 ntBASIC10.83□□□□□ -0.68
Pde6dO55057 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.83□□□□□ -0.68
Pde6dO55057 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pde6dO55057 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.82□□□□□ -0.68
Pde6dO55057 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pde6dO55057 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pde6dO55057 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms