Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.07■□□□□ 0
Trdmt1O55055 Gm27501-201ENSMUST00000183599 107 ntBASIC15.07■□□□□ 0
Trdmt1O55055 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Trdmt1O55055 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.07■□□□□ 0
Trdmt1O55055 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.07■□□□□ 0
Trdmt1O55055 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.07■□□□□ 0
Trdmt1O55055 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.07■□□□□ 0
Trdmt1O55055 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.07■□□□□ 0
Trdmt1O55055 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
Trdmt1O55055 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.07■□□□□ 0
Trdmt1O55055 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdmt1O55055 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Trdmt1O55055 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trdmt1O55055 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Trdmt1O55055 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.06■□□□□ 0
Trdmt1O55055 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trdmt1O55055 Gm11618-201ENSMUST00000117946 267 ntBASIC15.06■□□□□ 0
Trdmt1O55055 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.06■□□□□ 0
Trdmt1O55055 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.06■□□□□ 0
Trdmt1O55055 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.06■□□□□ 0
Trdmt1O55055 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trdmt1O55055 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.06■□□□□ 0
Trdmt1O55055 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trdmt1O55055 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.05■□□□□ 0
Trdmt1O55055 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trdmt1O55055 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trdmt1O55055 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trdmt1O55055 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.05■□□□□ -0
Trdmt1O55055 Gm14350-201ENSMUST00000116642 640 ntBASIC15.05■□□□□ -0
Trdmt1O55055 Gm7029-201ENSMUST00000173226 450 ntBASIC15.05■□□□□ -0
Trdmt1O55055 Gm27516-201ENSMUST00000184237 98 ntBASIC15.05■□□□□ -0
Trdmt1O55055 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trdmt1O55055 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.05■□□□□ -0
Trdmt1O55055 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trdmt1O55055 Gm10146-201ENSMUST00000072739 309 ntBASIC15.05■□□□□ -0
Trdmt1O55055 Gm16372-201ENSMUST00000073088 450 ntBASIC15.05■□□□□ -0
Trdmt1O55055 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trdmt1O55055 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trdmt1O55055 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.05■□□□□ -0
Trdmt1O55055 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trdmt1O55055 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trdmt1O55055 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trdmt1O55055 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trdmt1O55055 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trdmt1O55055 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trdmt1O55055 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdmt1O55055 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdmt1O55055 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdmt1O55055 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.04■□□□□ -0
Trdmt1O55055 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdmt1O55055 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trdmt1O55055 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trdmt1O55055 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdmt1O55055 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.04■□□□□ -0
Trdmt1O55055 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trdmt1O55055 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdmt1O55055 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trdmt1O55055 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trdmt1O55055 Mir686-201ENSMUST00000102174 109 ntBASIC15.04■□□□□ -0
Trdmt1O55055 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.04■□□□□ -0
Trdmt1O55055 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms