Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sptlc1O35704 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sptlc1O35704 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.17■□□□□ 0.02
Sptlc1O35704 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sptlc1O35704 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC15.16■□□□□ 0.02
Sptlc1O35704 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Sptlc1O35704 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC15.16■□□□□ 0.02
Sptlc1O35704 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Mir698-201ENSMUST00000102164 109 ntBASIC15.16■□□□□ 0.02
Sptlc1O35704 Gm26474-201ENSMUST00000116762 122 ntBASIC15.16■□□□□ 0.02
Sptlc1O35704 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Gm18944-201ENSMUST00000207672 643 ntBASIC15.16■□□□□ 0.02
Sptlc1O35704 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.16■□□□□ 0.02
Sptlc1O35704 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.16■□□□□ 0.02
Sptlc1O35704 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.16■□□□□ 0.02
Sptlc1O35704 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Sptlc1O35704 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.16■□□□□ 0.02
Sptlc1O35704 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Sptlc1O35704 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sptlc1O35704 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.15■□□□□ 0.02
Sptlc1O35704 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sptlc1O35704 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sptlc1O35704 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sptlc1O35704 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sptlc1O35704 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sptlc1O35704 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sptlc1O35704 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sptlc1O35704 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sptlc1O35704 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.15■□□□□ 0.02
Sptlc1O35704 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.15■□□□□ 0.02
Sptlc1O35704 Gm14539-201ENSMUST00000117527 174 ntBASIC15.15■□□□□ 0.02
Sptlc1O35704 Gm13226-201ENSMUST00000117838 404 ntBASIC15.15■□□□□ 0.02
Sptlc1O35704 Gm15968-201ENSMUST00000119342 1168 ntBASIC15.15■□□□□ 0.02
Sptlc1O35704 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.15■□□□□ 0.02
Sptlc1O35704 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sptlc1O35704 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.15■□□□□ 0.02
Sptlc1O35704 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sptlc1O35704 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC15.15■□□□□ 0.02
Sptlc1O35704 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sptlc1O35704 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sptlc1O35704 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Sptlc1O35704 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sptlc1O35704 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sptlc1O35704 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sptlc1O35704 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Sptlc1O35704 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Sptlc1O35704 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sptlc1O35704 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sptlc1O35704 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Sptlc1O35704 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sptlc1O35704 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sptlc1O35704 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sptlc1O35704 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sptlc1O35704 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sptlc1O35704 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sptlc1O35704 Gm43980-201ENSMUST00000204899 1612 ntBASIC15.14■□□□□ 0.01
Sptlc1O35704 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Sptlc1O35704 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sptlc1O35704 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Sptlc1O35704 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sptlc1O35704 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sptlc1O35704 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Sptlc1O35704 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.14■□□□□ 0.01
Sptlc1O35704 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sptlc1O35704 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sptlc1O35704 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sptlc1O35704 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sptlc1O35704 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sptlc1O35704 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Sptlc1O35704 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.14■□□□□ 0.01
Sptlc1O35704 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sptlc1O35704 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.14■□□□□ 0.01
Sptlc1O35704 Gm37017-201ENSMUST00000195266 747 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms