Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.8□□□□□ -0.04
Nr1i3O35627 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.8□□□□□ -0.04
Nr1i3O35627 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nr1i3O35627 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Nr1i3O35627 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.8□□□□□ -0.04
Nr1i3O35627 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nr1i3O35627 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1i3O35627 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1i3O35627 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1i3O35627 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1i3O35627 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Nr1i3O35627 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Nr1i3O35627 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nr1i3O35627 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1i3O35627 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nr1i3O35627 Gm6912-201ENSMUST00000117218 544 ntBASIC14.79□□□□□ -0.04
Nr1i3O35627 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.79□□□□□ -0.04
Nr1i3O35627 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Nr1i3O35627 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.79□□□□□ -0.04
Nr1i3O35627 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.79□□□□□ -0.04
Nr1i3O35627 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.79□□□□□ -0.04
Nr1i3O35627 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1i3O35627 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1i3O35627 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1i3O35627 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1i3O35627 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.79□□□□□ -0.04
Nr1i3O35627 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.79□□□□□ -0.04
Nr1i3O35627 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1i3O35627 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1i3O35627 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.79□□□□□ -0.04
Nr1i3O35627 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1i3O35627 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1i3O35627 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nr1i3O35627 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1i3O35627 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1i3O35627 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1i3O35627 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1i3O35627 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1i3O35627 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nr1i3O35627 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1i3O35627 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1i3O35627 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1i3O35627 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Nr1i3O35627 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1i3O35627 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.78□□□□□ -0.04
Nr1i3O35627 Gm2213-201ENSMUST00000197485 688 ntBASIC14.78□□□□□ -0.04
Nr1i3O35627 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1i3O35627 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1i3O35627 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1i3O35627 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1i3O35627 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nr1i3O35627 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.78□□□□□ -0.04
Nr1i3O35627 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.78□□□□□ -0.04
Nr1i3O35627 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1i3O35627 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1i3O35627 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1i3O35627 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1i3O35627 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nr1i3O35627 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nr1i3O35627 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nr1i3O35627 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nr1i3O35627 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nr1i3O35627 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nr1i3O35627 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nr1i3O35627 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nr1i3O35627 Grk6-205ENSMUST00000224653 2976 ntBASIC14.77□□□□□ -0.04
Nr1i3O35627 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nr1i3O35627 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nr1i3O35627 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nr1i3O35627 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nr1i3O35627 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nr1i3O35627 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.77□□□□□ -0.04
Nr1i3O35627 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nr1i3O35627 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Nr1i3O35627 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nr1i3O35627 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nr1i3O35627 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nr1i3O35627 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.77□□□□□ -0.05
Nr1i3O35627 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nr1i3O35627 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Nr1i3O35627 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.77□□□□□ -0.05
Nr1i3O35627 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Nr1i3O35627 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.77□□□□□ -0.05
Nr1i3O35627 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.77□□□□□ -0.05
Nr1i3O35627 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.77□□□□□ -0.05
Nr1i3O35627 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nr1i3O35627 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nr1i3O35627 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nr1i3O35627 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nr1i3O35627 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Nr1i3O35627 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nr1i3O35627 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nr1i3O35627 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nr1i3O35627 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nr1i3O35627 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms