Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col15a1O35206 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col15a1O35206 Gm18244-201ENSMUST00000219747 1566 ntBASIC17.44■□□□□ 0.38
Col15a1O35206 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col15a1O35206 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col15a1O35206 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col15a1O35206 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col15a1O35206 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col15a1O35206 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Col15a1O35206 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col15a1O35206 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col15a1O35206 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col15a1O35206 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col15a1O35206 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col15a1O35206 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col15a1O35206 Gm11637-201ENSMUST00000120601 592 ntBASIC17.43■□□□□ 0.38
Col15a1O35206 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col15a1O35206 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col15a1O35206 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col15a1O35206 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col15a1O35206 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.43■□□□□ 0.38
Col15a1O35206 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col15a1O35206 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col15a1O35206 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col15a1O35206 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col15a1O35206 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Col15a1O35206 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.43■□□□□ 0.38
Col15a1O35206 AC139350.1-201ENSMUST00000227064 1594 ntBASIC17.43■□□□□ 0.38
Col15a1O35206 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col15a1O35206 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Col15a1O35206 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col15a1O35206 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col15a1O35206 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.43■□□□□ 0.38
Col15a1O35206 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Col15a1O35206 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Col15a1O35206 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Col15a1O35206 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col15a1O35206 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col15a1O35206 Gm17376-201ENSMUST00000166016 84 ntBASIC17.42■□□□□ 0.38
Col15a1O35206 Rn7s1-201ENSMUST00000174924 300 ntBASIC17.42■□□□□ 0.38
Col15a1O35206 Rn7s2-201ENSMUST00000175032 300 ntBASIC17.42■□□□□ 0.38
Col15a1O35206 Gm26461-201ENSMUST00000175064 290 ntBASIC17.42■□□□□ 0.38
Col15a1O35206 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col15a1O35206 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col15a1O35206 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Col15a1O35206 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Col15a1O35206 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col15a1O35206 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.42■□□□□ 0.38
Col15a1O35206 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col15a1O35206 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col15a1O35206 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col15a1O35206 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col15a1O35206 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.42■□□□□ 0.38
Col15a1O35206 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.42■□□□□ 0.38
Col15a1O35206 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Col15a1O35206 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col15a1O35206 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Col15a1O35206 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col15a1O35206 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col15a1O35206 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col15a1O35206 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.42■□□□□ 0.38
Col15a1O35206 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col15a1O35206 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col15a1O35206 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col15a1O35206 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col15a1O35206 Gm7899-201ENSMUST00000192935 1897 ntBASIC17.42■□□□□ 0.38
Col15a1O35206 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col15a1O35206 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col15a1O35206 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC17.41■□□□□ 0.38
Col15a1O35206 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col15a1O35206 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col15a1O35206 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Col15a1O35206 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col15a1O35206 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Col15a1O35206 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col15a1O35206 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col15a1O35206 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col15a1O35206 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col15a1O35206 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col15a1O35206 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col15a1O35206 Gm15889-202ENSMUST00000212669 2443 ntBASIC17.41■□□□□ 0.38
Col15a1O35206 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col15a1O35206 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col15a1O35206 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col15a1O35206 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Col15a1O35206 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col15a1O35206 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col15a1O35206 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col15a1O35206 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Gm4986-201ENSMUST00000119731 549 ntBASIC17.4■□□□□ 0.38
Col15a1O35206 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Col15a1O35206 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.4■□□□□ 0.38
Col15a1O35206 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Col15a1O35206 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms