Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tcof1O08784 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcof1O08784 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcof1O08784 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.07■□□□□ 0.16
Tcof1O08784 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tcof1O08784 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcof1O08784 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Tcof1O08784 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcof1O08784 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tcof1O08784 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcof1O08784 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcof1O08784 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcof1O08784 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.07■□□□□ 0.16
Tcof1O08784 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.07■□□□□ 0.16
Tcof1O08784 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcof1O08784 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Tcof1O08784 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcof1O08784 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tcof1O08784 Gm27772-201ENSMUST00000184900 187 ntBASIC16.07■□□□□ 0.16
Tcof1O08784 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.07■□□□□ 0.16
Tcof1O08784 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.07■□□□□ 0.16
Tcof1O08784 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcof1O08784 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
Tcof1O08784 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Tcof1O08784 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcof1O08784 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Tcof1O08784 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcof1O08784 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcof1O08784 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
Tcof1O08784 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Tcof1O08784 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.06■□□□□ 0.16
Tcof1O08784 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.06■□□□□ 0.16
Tcof1O08784 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.06■□□□□ 0.16
Tcof1O08784 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 Gm8602-201ENSMUST00000184045 607 ntBASIC16.06■□□□□ 0.16
Tcof1O08784 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 Gm18307-201ENSMUST00000206864 949 ntBASIC16.06■□□□□ 0.16
Tcof1O08784 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.06■□□□□ 0.16
Tcof1O08784 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Tcof1O08784 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Tcof1O08784 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.06■□□□□ 0.16
Tcof1O08784 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tcof1O08784 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.06■□□□□ 0.16
Tcof1O08784 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Tcof1O08784 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Tcof1O08784 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.05■□□□□ 0.16
Tcof1O08784 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.05■□□□□ 0.16
Tcof1O08784 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.05■□□□□ 0.16
Tcof1O08784 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Tcof1O08784 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Tcof1O08784 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Tcof1O08784 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Tcof1O08784 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Tcof1O08784 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcof1O08784 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tcof1O08784 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tcof1O08784 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tcof1O08784 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Tcof1O08784 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tcof1O08784 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms