Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Casp6O08738 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Casp6O08738 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Casp6O08738 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Casp6O08738 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Casp6O08738 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.77□□□□□ -0.53
Casp6O08738 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Casp6O08738 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.77□□□□□ -0.53
Casp6O08738 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Casp6O08738 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Casp6O08738 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.77□□□□□ -0.53
Casp6O08738 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Casp6O08738 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Casp6O08738 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Casp6O08738 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Casp6O08738 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Casp6O08738 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.76□□□□□ -0.53
Casp6O08738 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Casp6O08738 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.76□□□□□ -0.53
Casp6O08738 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.76□□□□□ -0.53
Casp6O08738 Gm6152-201ENSMUST00000151704 340 ntBASIC11.76□□□□□ -0.53
Casp6O08738 Gm29127-201ENSMUST00000188304 517 ntBASIC11.76□□□□□ -0.53
Casp6O08738 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Casp6O08738 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Gm5161-201ENSMUST00000075243 853 ntBASIC11.76□□□□□ -0.53
Casp6O08738 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.76□□□□□ -0.53
Casp6O08738 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Casp6O08738 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.76□□□□□ -0.53
Casp6O08738 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.76□□□□□ -0.53
Casp6O08738 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.76□□□□□ -0.53
Casp6O08738 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Casp6O08738 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.76□□□□□ -0.53
Casp6O08738 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.76□□□□□ -0.53
Casp6O08738 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Casp6O08738 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.76□□□□□ -0.53
Casp6O08738 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC11.76□□□□□ -0.53
Casp6O08738 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Casp6O08738 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Casp6O08738 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Casp6O08738 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.75□□□□□ -0.53
Casp6O08738 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Gm24196-201ENSMUST00000179161 110 ntBASIC11.75□□□□□ -0.53
Casp6O08738 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.75□□□□□ -0.53
Casp6O08738 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.75□□□□□ -0.53
Casp6O08738 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.75□□□□□ -0.53
Casp6O08738 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.75□□□□□ -0.53
Casp6O08738 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.75□□□□□ -0.53
Casp6O08738 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.75□□□□□ -0.53
Casp6O08738 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Casp6O08738 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms