Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.21□□□□□ -0.46
Raet1bO08603 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Raet1bO08603 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Raet1bO08603 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Raet1bO08603 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Raet1bO08603 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.21□□□□□ -0.46
Raet1bO08603 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Raet1bO08603 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Raet1bO08603 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.2□□□□□ -0.46
Raet1bO08603 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.2□□□□□ -0.46
Raet1bO08603 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.2□□□□□ -0.46
Raet1bO08603 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.2□□□□□ -0.46
Raet1bO08603 Gm4875-201ENSMUST00000118257 786 ntBASIC12.2□□□□□ -0.46
Raet1bO08603 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.2□□□□□ -0.46
Raet1bO08603 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Raet1bO08603 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.2□□□□□ -0.46
Raet1bO08603 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Raet1bO08603 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Raet1bO08603 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Raet1bO08603 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Raet1bO08603 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Raet1bO08603 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.19□□□□□ -0.46
Raet1bO08603 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Raet1bO08603 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Raet1bO08603 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.19□□□□□ -0.46
Raet1bO08603 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Raet1bO08603 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.19□□□□□ -0.46
Raet1bO08603 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.19□□□□□ -0.46
Raet1bO08603 Gm5425-201ENSMUST00000214125 459 ntBASIC12.19□□□□□ -0.46
Raet1bO08603 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.19□□□□□ -0.46
Raet1bO08603 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Raet1bO08603 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.19□□□□□ -0.46
Raet1bO08603 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Raet1bO08603 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Raet1bO08603 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Raet1bO08603 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1bO08603 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Raet1bO08603 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.18□□□□□ -0.46
Raet1bO08603 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1bO08603 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1bO08603 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.18□□□□□ -0.46
Raet1bO08603 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1bO08603 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1bO08603 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1bO08603 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1bO08603 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Raet1bO08603 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1bO08603 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Raet1bO08603 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1bO08603 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1bO08603 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1bO08603 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1bO08603 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Raet1bO08603 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.18□□□□□ -0.46
Raet1bO08603 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms