Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
B020004C17RikJ3QP07 Gm6621-201ENSMUST00000193251 772 ntBASIC15.25■□□□□ 0.03
B020004C17RikJ3QP07 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.25■□□□□ 0.03
B020004C17RikJ3QP07 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
B020004C17RikJ3QP07 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
B020004C17RikJ3QP07 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
B020004C17RikJ3QP07 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
B020004C17RikJ3QP07 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
B020004C17RikJ3QP07 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
B020004C17RikJ3QP07 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.25■□□□□ 0.03
B020004C17RikJ3QP07 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
B020004C17RikJ3QP07 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
B020004C17RikJ3QP07 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
B020004C17RikJ3QP07 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Gm15370-201ENSMUST00000117158 253 ntBASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Gm2991-201ENSMUST00000173338 480 ntBASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Gm26461-201ENSMUST00000175064 290 ntBASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Mospd4-201ENSMUST00000180618 576 ntBASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Gm21769-201ENSMUST00000211922 111 ntBASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
B020004C17RikJ3QP07 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Gm6447-201ENSMUST00000118905 835 ntBASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Gm14381-201ENSMUST00000122105 414 ntBASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Gm7809-201ENSMUST00000153199 742 ntBASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
B020004C17RikJ3QP07 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Gm4986-201ENSMUST00000119731 549 ntBASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Gm37489-201ENSMUST00000191883 159 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms