Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Gm25925-201ENSMUST00000158314 306 ntBASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Gm20553-201ENSMUST00000204205 844 ntBASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.53□□□□□ -0.4
Shisa8J3QNX5 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shisa8J3QNX5 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Shisa8J3QNX5 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Shisa8J3QNX5 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Shisa8J3QNX5 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.52□□□□□ -0.4
Shisa8J3QNX5 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Shisa8J3QNX5 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Shisa8J3QNX5 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Shisa8J3QNX5 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Gm2651-201ENSMUST00000203560 838 ntBASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Shisa8J3QNX5 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Gm44608-201ENSMUST00000206827 855 ntBASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.51□□□□□ -0.41
Shisa8J3QNX5 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.51□□□□□ -0.41
Shisa8J3QNX5 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms