Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Gm5867-201ENSMUST00000063197 592 ntBASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Pcdh9F8VPK8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdh9F8VPK8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Gm15653-201ENSMUST00000119247 907 ntBASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Gm28630-201ENSMUST00000187806 498 ntBASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh9F8VPK8 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Pcdh9F8VPK8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh9F8VPK8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Pcdh9F8VPK8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh9F8VPK8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.08□□□□□ -0.15
Pcdh9F8VPK8 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdh9F8VPK8 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh9F8VPK8 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh9F8VPK8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh9F8VPK8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh9F8VPK8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh9F8VPK8 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.08□□□□□ -0.16
Pcdh9F8VPK8 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh9F8VPK8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh9F8VPK8 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh9F8VPK8 Gm15460-201ENSMUST00000118147 391 ntBASIC14.08□□□□□ -0.16
Pcdh9F8VPK8 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdh9F8VPK8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.08□□□□□ -0.16
Pcdh9F8VPK8 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms