Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Gm38210-201ENSMUST00000191944 809 ntBASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc188F6WEU2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Gm12816-201ENSMUST00000118069 1212 ntBASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Gm14109-201ENSMUST00000118814 309 ntBASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Gm12502-201ENSMUST00000120197 444 ntBASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Gm7666-201ENSMUST00000146631 819 ntBASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Gm2546-201ENSMUST00000182630 991 ntBASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Gm8365-201ENSMUST00000197334 648 ntBASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Gm44069-201ENSMUST00000204898 506 ntBASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Gm4768-201ENSMUST00000206199 686 ntBASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Ntng1-201ENSMUST00000051253 327 ntBASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Gm10179-201ENSMUST00000086233 688 ntBASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc188F6WEU2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc188F6WEU2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc188F6WEU2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc188F6WEU2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.73□□□□□ -0.21
Ccdc188F6WEU2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc188F6WEU2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Ccdc188F6WEU2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc188F6WEU2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ccdc188F6WEU2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc188F6WEU2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.73□□□□□ -0.21
Ccdc188F6WEU2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.73□□□□□ -0.21
Ccdc188F6WEU2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.73□□□□□ -0.21
Ccdc188F6WEU2 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Ccdc188F6WEU2 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc188F6WEU2 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc188F6WEU2 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms