Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb9E9Q5G2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Gm42550-201ENSMUST00000201553 960 ntBASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb9E9Q5G2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb9E9Q5G2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Gm15806-201ENSMUST00000120696 955 ntBASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb9E9Q5G2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb9E9Q5G2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms