Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Gm11941-201ENSMUST00000119904 610 ntBASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Gm45500-201ENSMUST00000211676 803 ntBASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Col6a3E9PWQ3 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Gm13937-201ENSMUST00000121000 988 ntBASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Daam2-202ENSMUST00000224595 1926 ntBASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Gm12990-201ENSMUST00000120372 468 ntBASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Col6a3E9PWQ3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Gm12943-201ENSMUST00000119616 210 ntBASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Gm13549-201ENSMUST00000118339 796 ntBASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a3E9PWQ3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms