Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hfm1D3Z4R1 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 AC123857.2-201ENSMUST00000225756 1582 ntBASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 AC167669.2-201ENSMUST00000224417 1620 ntBASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 Gm11531-201ENSMUST00000117614 555 ntBASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 Gm12217-201ENSMUST00000118858 696 ntBASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 Gm24514-201ENSMUST00000174961 285 ntBASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 Gstp-ps-201ENSMUST00000195526 631 ntBASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hfm1D3Z4R1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 Gm14130-201ENSMUST00000118417 987 ntBASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 Gm13665-201ENSMUST00000120830 528 ntBASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 Gm15276-201ENSMUST00000145953 498 ntBASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hfm1D3Z4R1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Gm12566-201ENSMUST00000121479 359 ntBASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Gm44967-201ENSMUST00000207047 631 ntBASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Gm9004-201ENSMUST00000218739 1222 ntBASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
Hfm1D3Z4R1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Gm12539-201ENSMUST00000121549 1098 ntBASIC18.93■□□□□ 0.62
Hfm1D3Z4R1 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms