Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chd6A3KFM7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd6A3KFM7 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd6A3KFM7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chd6A3KFM7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Gm42550-201ENSMUST00000201553 960 ntBASIC11.01□□□□□ -0.65
Chd6A3KFM7 Gm7848-201ENSMUST00000210739 718 ntBASIC11.01□□□□□ -0.65
Chd6A3KFM7 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.01□□□□□ -0.65
Chd6A3KFM7 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.01□□□□□ -0.65
Chd6A3KFM7 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.01□□□□□ -0.65
Chd6A3KFM7 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Gm5909-201ENSMUST00000119768 1281 ntBASIC11.01□□□□□ -0.65
Chd6A3KFM7 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.01□□□□□ -0.65
Chd6A3KFM7 Gm26315-201ENSMUST00000083890 321 ntBASIC11.01□□□□□ -0.65
Chd6A3KFM7 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.01□□□□□ -0.65
Chd6A3KFM7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.01□□□□□ -0.65
Chd6A3KFM7 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.01□□□□□ -0.65
Chd6A3KFM7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Chd6A3KFM7 Gm25214-201ENSMUST00000104573 129 ntBASIC11□□□□□ -0.65
Chd6A3KFM7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Chd6A3KFM7 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Chd6A3KFM7 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Gm9555-201ENSMUST00000200908 583 ntBASIC11□□□□□ -0.65
Chd6A3KFM7 CT030135.2-201ENSMUST00000225255 893 ntBASIC11□□□□□ -0.65
Chd6A3KFM7 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11□□□□□ -0.65
Chd6A3KFM7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
Chd6A3KFM7 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Chd6A3KFM7 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC11□□□□□ -0.65
Chd6A3KFM7 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11□□□□□ -0.65
Chd6A3KFM7 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11□□□□□ -0.65
Chd6A3KFM7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11□□□□□ -0.65
Chd6A3KFM7 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Chd6A3KFM7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11□□□□□ -0.65
Chd6A3KFM7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11□□□□□ -0.65
Chd6A3KFM7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Gm14608-201ENSMUST00000120030 1553 ntBASIC11□□□□□ -0.65
Chd6A3KFM7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chd6A3KFM7 Gm23270-201ENSMUST00000104055 131 ntBASIC11□□□□□ -0.65
Chd6A3KFM7 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11□□□□□ -0.65
Chd6A3KFM7 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms