Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb1A2AQ07 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.1□□□□□ -0.15
Tubb1A2AQ07 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb1A2AQ07 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb1A2AQ07 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Tubb1A2AQ07 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.09□□□□□ -0.15
Tubb1A2AQ07 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Tubb1A2AQ07 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Tubb1A2AQ07 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tubb1A2AQ07 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tubb1A2AQ07 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 Gm15393-201ENSMUST00000120499 219 ntBASIC14.08□□□□□ -0.16
Tubb1A2AQ07 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 Gm7775-201ENSMUST00000218871 853 ntBASIC14.08□□□□□ -0.16
Tubb1A2AQ07 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb1A2AQ07 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Gm27430-201ENSMUST00000184585 107 ntBASIC14.07□□□□□ -0.16
Tubb1A2AQ07 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Gm44333-201ENSMUST00000197168 107 ntBASIC14.07□□□□□ -0.16
Tubb1A2AQ07 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Tubb1A2AQ07 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Tubb1A2AQ07 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubb1A2AQ07 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.06□□□□□ -0.16
Tubb1A2AQ07 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tubb1A2AQ07 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms