Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc112A0AUP1 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ccdc112A0AUP1 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Gm24543-201ENSMUST00000103867 82 ntBASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ccdc112A0AUP1 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc112A0AUP1 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc112A0AUP1 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc112A0AUP1 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc112A0AUP1 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ccdc112A0AUP1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.71■□□□□ 0.1
Ccdc112A0AUP1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Gm24158-201ENSMUST00000175263 71 ntBASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Gm33320-201ENSMUST00000192232 530 ntBASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc112A0AUP1 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms