Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm27533-201ENSMUST00000183800 152 ntBASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm12428-201ENSMUST00000119844 727 ntBASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm13616-201ENSMUST00000120600 222 ntBASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm3809-201ENSMUST00000180973 1006 ntBASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm17837-201ENSMUST00000186435 985 ntBASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm29741-201ENSMUST00000192667 421 ntBASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav9n-2A0A0G2JDP3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav9n-2A0A0G2JDP3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav9n-2A0A0G2JDP3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms