Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.28□□□□□ -0.6
Trav18A0A075B656 Dupd1-202ENSMUST00000224735 548 ntBASIC11.28□□□□□ -0.6
Trav18A0A075B656 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.28□□□□□ -0.6
Trav18A0A075B656 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.28□□□□□ -0.6
Trav18A0A075B656 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav18A0A075B656 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav18A0A075B656 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav18A0A075B656 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav18A0A075B656 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Gm5566-201ENSMUST00000116118 459 ntBASIC11.27□□□□□ -0.61
Trav18A0A075B656 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Gm43474-201ENSMUST00000196415 774 ntBASIC11.27□□□□□ -0.61
Trav18A0A075B656 Gm6443-201ENSMUST00000203599 874 ntBASIC11.27□□□□□ -0.61
Trav18A0A075B656 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.27□□□□□ -0.61
Trav18A0A075B656 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.27□□□□□ -0.61
Trav18A0A075B656 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trav18A0A075B656 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav18A0A075B656 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.27□□□□□ -0.61
Trav18A0A075B656 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.27□□□□□ -0.61
Trav18A0A075B656 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav18A0A075B656 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.26□□□□□ -0.61
Trav18A0A075B656 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Gm6916-202ENSMUST00000205523 195 ntBASIC11.26□□□□□ -0.61
Trav18A0A075B656 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.26□□□□□ -0.61
Trav18A0A075B656 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.26□□□□□ -0.61
Trav18A0A075B656 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.26□□□□□ -0.61
Trav18A0A075B656 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms