Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5-4A0A075B652 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5-4A0A075B652 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5-4A0A075B652 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.55□□□□□ -0.56
Trav5-4A0A075B652 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5-4A0A075B652 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 AA543401-201ENSMUST00000164248 1269 ntBASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Gm24513-201ENSMUST00000174964 138 ntBASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Gm27631-201ENSMUST00000184163 466 ntBASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Gm2213-201ENSMUST00000197485 688 ntBASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 BC001981-202ENSMUST00000191393 1545 ntBASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5-4A0A075B652 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Gm43474-201ENSMUST00000196415 774 ntBASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Gm45453-201ENSMUST00000211758 853 ntBASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav5-4A0A075B652 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav5-4A0A075B652 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav5-4A0A075B652 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.52□□□□□ -0.56
Trav5-4A0A075B652 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
Trav5-4A0A075B652 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.52□□□□□ -0.56
Trav5-4A0A075B652 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trav5-4A0A075B652 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav5-4A0A075B652 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav5-4A0A075B652 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav5-4A0A075B652 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav5-4A0A075B652 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trav5-4A0A075B652 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Trav5-4A0A075B652 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.52□□□□□ -0.56
Trav5-4A0A075B652 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms