Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.12□□□□□ -0.15
Speer3W4VSP1 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.12□□□□□ -0.15
Speer3W4VSP1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Gm27920-201ENSMUST00000183953 96 ntBASIC14.12□□□□□ -0.15
Speer3W4VSP1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.12□□□□□ -0.15
Speer3W4VSP1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Speer3W4VSP1 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.11□□□□□ -0.15
Speer3W4VSP1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Gm14822-201ENSMUST00000122247 291 ntBASIC14.11□□□□□ -0.15
Speer3W4VSP1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.11□□□□□ -0.15
Speer3W4VSP1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Gm2756-201ENSMUST00000195851 400 ntBASIC14.11□□□□□ -0.15
Speer3W4VSP1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.11□□□□□ -0.15
Speer3W4VSP1 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.11□□□□□ -0.15
Speer3W4VSP1 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.11□□□□□ -0.15
Speer3W4VSP1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Speer3W4VSP1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC14.1□□□□□ -0.15
Speer3W4VSP1 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Gm5479-201ENSMUST00000160578 435 ntBASIC14.1□□□□□ -0.15
Speer3W4VSP1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Gm40332-201ENSMUST00000199847 938 ntBASIC14.1□□□□□ -0.15
Speer3W4VSP1 Gm18057-201ENSMUST00000208220 503 ntBASIC14.1□□□□□ -0.15
Speer3W4VSP1 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Speer3W4VSP1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Speer3W4VSP1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms