Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Mir125a-201ENSMUST00000083545 68 ntBASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.41□□□□□ -0.42
H2afb3S4R1G7 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Gm2445-201ENSMUST00000182798 989 ntBASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb3S4R1G7 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
H2afb3S4R1G7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.4□□□□□ -0.43
H2afb3S4R1G7 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
H2afb3S4R1G7 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Gm25911-201ENSMUST00000157621 56 ntBASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Mir6990-201ENSMUST00000183724 91 ntBASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Gm27525-201ENSMUST00000184465 107 ntBASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Gm43514-201ENSMUST00000198852 424 ntBASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Gm43125-201ENSMUST00000201724 730 ntBASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Gm18027-201ENSMUST00000218947 619 ntBASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb3S4R1G7 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms