Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hdac6Q9Z2V5 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Hdac6Q9Z2V5 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Gm24255-201ENSMUST00000104481 128 ntBASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Gm11591-201ENSMUST00000120063 702 ntBASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Gm5637-201ENSMUST00000153890 1119 ntBASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 AC154532.1-201ENSMUST00000227860 965 ntBASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hdac6Q9Z2V5 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Gm15370-201ENSMUST00000117158 253 ntBASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Gm6621-201ENSMUST00000193251 772 ntBASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Gm44069-201ENSMUST00000204898 506 ntBASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hdac6Q9Z2V5 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Gm8805-201ENSMUST00000117848 313 ntBASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Gm13297-201ENSMUST00000120205 934 ntBASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Gm2231-201ENSMUST00000125661 612 ntBASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Gm2991-201ENSMUST00000173338 480 ntBASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Gm38000-201ENSMUST00000192390 1215 ntBASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac6Q9Z2V5 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms