Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cx3cr1Q9Z0D9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cx3cr1Q9Z0D9 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cx3cr1Q9Z0D9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Cx3cr1Q9Z0D9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cx3cr1Q9Z0D9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.65□□□□□ -0.55
Cx3cr1Q9Z0D9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm6973-201ENSMUST00000117080 721 ntBASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Mir5131-201ENSMUST00000175426 93 ntBASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm7977-201ENSMUST00000193787 748 ntBASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.64□□□□□ -0.55
Cx3cr1Q9Z0D9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 AA543401-201ENSMUST00000164248 1269 ntBASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm29741-201ENSMUST00000192667 421 ntBASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm5864-201ENSMUST00000202263 970 ntBASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm18195-201ENSMUST00000207604 706 ntBASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cx3cr1Q9Z0D9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms