Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CcsQ9WU84 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC10.72□□□□□ -0.69
CcsQ9WU84 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC10.72□□□□□ -0.69
CcsQ9WU84 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC10.72□□□□□ -0.69
CcsQ9WU84 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CcsQ9WU84 Gm44945-201ENSMUST00000206764 1187 ntBASIC10.72□□□□□ -0.69
CcsQ9WU84 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC10.72□□□□□ -0.69
CcsQ9WU84 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
CcsQ9WU84 Ndufaf2-202ENSMUST00000223734 556 ntBASIC10.72□□□□□ -0.69
CcsQ9WU84 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CcsQ9WU84 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 AC119177.1-201ENSMUST00000227647 1332 ntBASIC10.72□□□□□ -0.69
CcsQ9WU84 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CcsQ9WU84 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC10.72□□□□□ -0.69
CcsQ9WU84 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.72□□□□□ -0.69
CcsQ9WU84 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.72□□□□□ -0.69
CcsQ9WU84 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.72□□□□□ -0.69
CcsQ9WU84 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
CcsQ9WU84 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
CcsQ9WU84 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CcsQ9WU84 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
CcsQ9WU84 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
CcsQ9WU84 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CcsQ9WU84 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
CcsQ9WU84 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
CcsQ9WU84 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC10.71□□□□□ -0.69
CcsQ9WU84 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
CcsQ9WU84 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC10.71□□□□□ -0.69
CcsQ9WU84 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.71□□□□□ -0.69
CcsQ9WU84 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
CcsQ9WU84 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
CcsQ9WU84 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Gm7229-201ENSMUST00000214719 1007 ntBASIC10.71□□□□□ -0.69
CcsQ9WU84 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.71□□□□□ -0.69
CcsQ9WU84 Celf4-206ENSMUST00000224553 1729 ntBASIC10.71□□□□□ -0.69
CcsQ9WU84 AC154572.2-201ENSMUST00000225105 997 ntBASIC10.71□□□□□ -0.69
CcsQ9WU84 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CcsQ9WU84 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
CcsQ9WU84 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
CcsQ9WU84 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CcsQ9WU84 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
CcsQ9WU84 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
CcsQ9WU84 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CcsQ9WU84 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
CcsQ9WU84 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CcsQ9WU84 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CcsQ9WU84 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CcsQ9WU84 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CcsQ9WU84 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CcsQ9WU84 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms