Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trem1Q9JKE2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trem1Q9JKE2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trem1Q9JKE2 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms