Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Gm6736-201ENSMUST00000166583 948 ntBASIC12.93□□□□□ -0.34
Trim39Q9ESN2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Gm37935-201ENSMUST00000192012 982 ntBASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Gm44335-201ENSMUST00000196879 141 ntBASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Gm44297-201ENSMUST00000198304 141 ntBASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Gm44346-201ENSMUST00000198851 141 ntBASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim39Q9ESN2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Mir6990-201ENSMUST00000183724 91 ntBASIC12.92□□□□□ -0.34
Trim39Q9ESN2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Gm43125-201ENSMUST00000201724 730 ntBASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Thoc7-209ENSMUST00000225325 765 ntBASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim39Q9ESN2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim39Q9ESN2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms