Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.33■□□□□ 0.2
Ube3bQ9ES34 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.33■□□□□ 0.2
Ube3bQ9ES34 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube3bQ9ES34 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ube3bQ9ES34 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.33■□□□□ 0.2
Ube3bQ9ES34 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.33■□□□□ 0.2
Ube3bQ9ES34 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube3bQ9ES34 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube3bQ9ES34 Gm5356-201ENSMUST00000093326 615 ntBASIC16.33■□□□□ 0.2
Ube3bQ9ES34 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC16.33■□□□□ 0.2
Ube3bQ9ES34 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube3bQ9ES34 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ube3bQ9ES34 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube3bQ9ES34 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube3bQ9ES34 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ube3bQ9ES34 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube3bQ9ES34 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube3bQ9ES34 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube3bQ9ES34 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ube3bQ9ES34 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube3bQ9ES34 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube3bQ9ES34 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Gm18187-201ENSMUST00000196476 984 ntBASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.32■□□□□ 0.2
Ube3bQ9ES34 AC154532.1-201ENSMUST00000227860 965 ntBASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.32■□□□□ 0.2
Ube3bQ9ES34 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Gm17794-201ENSMUST00000220252 955 ntBASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube3bQ9ES34 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ube3bQ9ES34 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3bQ9ES34 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3bQ9ES34 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3bQ9ES34 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ube3bQ9ES34 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3bQ9ES34 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ube3bQ9ES34 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3bQ9ES34 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3bQ9ES34 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.3■□□□□ 0.2
Ube3bQ9ES34 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3bQ9ES34 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3bQ9ES34 Gm8602-201ENSMUST00000184045 607 ntBASIC16.3■□□□□ 0.2
Ube3bQ9ES34 Gm29608-201ENSMUST00000190444 463 ntBASIC16.3■□□□□ 0.2
Ube3bQ9ES34 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.3■□□□□ 0.2
Ube3bQ9ES34 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.3■□□□□ 0.2
Ube3bQ9ES34 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3bQ9ES34 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3bQ9ES34 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3bQ9ES34 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube3bQ9ES34 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms