Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Gm17330-201ENSMUST00000221047 165 ntBASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-4Q9EQM3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Gm11591-201ENSMUST00000120063 702 ntBASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Gm13123-201ENSMUST00000122173 492 ntBASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 B9d1os-201ENSMUST00000137010 674 ntBASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Gm24990-201ENSMUST00000157406 323 ntBASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.04□□□□□ -0.16
Nkx2-4Q9EQM3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Gm15770-201ENSMUST00000117498 584 ntBASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Gm13461-201ENSMUST00000120980 662 ntBASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Gm7809-201ENSMUST00000153199 742 ntBASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms