Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Gm16177-201ENSMUST00000120728 718 ntBASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Gm8810-201ENSMUST00000172895 754 ntBASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Gm24447-201ENSMUST00000083977 338 ntBASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rrp8Q9DB85 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Gm45880-201ENSMUST00000213041 853 ntBASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rrp8Q9DB85 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rrp8Q9DB85 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms