Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Gm45242-201ENSMUST00000210666 2129 ntBASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Gm27631-201ENSMUST00000184163 466 ntBASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Gm45453-201ENSMUST00000211758 853 ntBASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.21■□□□□ 0.35
Chmp5Q9D7S9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.34
Chmp5Q9D7S9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Chmp5Q9D7S9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Chmp5Q9D7S9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Chmp5Q9D7S9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Chmp5Q9D7S9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Chmp5Q9D7S9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Chmp5Q9D7S9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Chmp5Q9D7S9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 AC149294.4-201ENSMUST00000227870 882 ntBASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp5Q9D7S9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms