Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.2□□□□□ -0.62
Hdhd3Q9CYW4 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Hdhd3Q9CYW4 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Mir5131-201ENSMUST00000175426 93 ntBASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Gm2445-201ENSMUST00000182798 989 ntBASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Gm7461-201ENSMUST00000058918 827 ntBASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms