Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Mir8098-201ENSMUST00000184011 137 ntBASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx47Q9CWX9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ddx47Q9CWX9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ddx47Q9CWX9 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ddx47Q9CWX9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ddx47Q9CWX9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx47Q9CWX9 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.13□□□□□ -0.15
Ddx47Q9CWX9 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ddx47Q9CWX9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms