Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Smc1aQ9CU62 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Gm14127-201ENSMUST00000117906 678 ntBASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Gm28631-201ENSMUST00000190740 334 ntBASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc1aQ9CU62 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Gm12859-201ENSMUST00000117834 427 ntBASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Gm12490-201ENSMUST00000120255 560 ntBASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Mir1897-201ENSMUST00000122581 272 ntBASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc1aQ9CU62 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smc1aQ9CU62 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms